PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009587051.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 490aa    MW: 54085.6 Da    PI: 6.4593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009587051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.39.8e-31258316259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_009587051.1 258 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 316
                     7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-33242318IPR003657WRKY domain
SuperFamilySSF1182905.89E-28250318IPR003657WRKY domain
PROSITE profilePS5081129.562252318IPR003657WRKY domain
SMARTSM007741.8E-36257317IPR003657WRKY domain
PfamPF031061.1E-26259316IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MNMNPREEQP SFSSADEKGV MLNEVDFFSD KRIKPMDVVI KKEDSHGENT TSTRSELLVN  60
TGLQLVSVNT GSDQSTVDDG ISSEIEDKRV KIELAQLQVE LGRMNAENQR LRGMLSQVSN  120
NYTALQMHLV TLMQQQQISR TENDHEIVEA KLEEKKQEKD GNMVPRQFLE LGPSEHMDEP  180
YSLNSHYSSS EERTVSESPR NNIEVTRHKG IGREETPESE SNKVPKLNSS NPIDQATEAT  240
MRKARVSVRA RSEAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE  300
DRTILITTYE GTHNHPLPPA AMAMASTTSA AANMLLSGSM PSADGLMNSN FLARTILPSS  360
SSVATISASA PFPTITLDLT QNQNSISYYH QRTHPTAQFQ VPFPIGPHNP NFITSMPPPP  420
MPQVLHNQSK FSGLQVSQDI HHQPPQHALN QPSFSDTLNA ATAAITADPN FTAALAAAIS  480
SIITGSQKEQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22244320176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587051.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-152WRKY6_ARATH; WRKY transcription factor 6
TrEMBLC7E5X80.0C7E5X8_CAPAN; Transcription factor WRKY
STRINGPGSC0003DMT4000424000.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-124WRKY family protein